Publications

More Publications

(2018). Bioconda: A sustainable and comprehensive software distribution for the life sciences. NatMeth.

Preprint Project

(2018). GlobAl Distribution of GEnetic Traits (GADGET) web server: polygenic trait scores worldwide. NAR.

PDF Project Source Document

(2018). Characterization of a nontypeable Haemophilus influenzae Thermonuclease. PONE.

PDF Source Document

(2018). Genome sequences of 15 Klebsiella spp. isolates from sugarcane fields in Colombia’s Cauca Valley. GenomeA.

PDF Dataset Project Source Document

(2017). Influence of genetic ancestry and socioeconomic status on type 2 diabetes in the diverse Colombian populations of Chocó and Antioquia. SciRep.

PDF Project Source Document

Projects

GADGET

Global Distribtion of Genetic Traits - is a visual platform for exploring the genetic basis of human phenotypic diversity

ChocoGEN

Genetic ancestry and health in the Colombian Pacific

Vibriocholera.com

Prediction of Type VI Secretion Systems in Vibrio cholerae

rampdb

A central repository for: (1) Exploring known information regarding RAMPs, GPCRs and associated ligands; (2) Predicting potential RAMP interactions with your sequence or ligand; (3) Visualizing currently known interactions between RAMPs, GPCRs and ligands

Teaching

I help design and teach the MS Bioinformatics capstone classes at Georgia Tech

  • BIOL7200 Programming for Bioinformatics
  • BIOL7210 Computational Genomics

I also help design and deliver 40+ 2- and 4-day workforce development courses. More information about these courses can be found on the Applied Bioinformatics Laboratory’s website.

Contact